BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H07LP1|AL426602
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig485 1054 0.0
>3x_Contig485
Length = 1328
Score = 1054 bits (523), Expect = 0.0
Identities = 584/609 (95%), Gaps = 2/609 (0%)
Strand = Plus / Minus
Query: 207 acaatccgttgaaatgcaaaagaaagtccaacaggaacaacaagcggctaccacgaaatt 266
|||| ||| ||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1324 acaaaccggtgaaaggcgaaagaaagtccaacaggaacgacaagcggctaccacgaaatt 1265
Query: 267 cgawgactcttcagatttcggcggtacattctttgttcttcccattgatgactccaacga 326
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1264 cgaagactcttcagatttcggcggtacattctttgatcttcccattgatgactccaacga 1205
Query: 327 aaatgcagttatatctccagatagrtcagtagatactcttgakagacaaattccaacacc 386
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 1204 aaatgcagttatatctccagatagatcagtagatactcttgaaagacaaattccaacacc 1145
Query: 387 aaatttccttacgaacacgttcccagttgaaccaaatactagtwtttcaggagtgartac 446
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 1144 aaatttccttacgaacacgttcccagttgaaccaaatactagtatttcaggagtgaatac 1085
Query: 447 cttgaatacttctcagacagccaatttgttctcaagcacaaactttggtgcatcattggr 506
||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1084 cttgaatacttctcaaacagcaaatttgttctcaagcacaaactttggtgcatcattgga 1025
Query: 507 -ccccgttgakaacsatatggrtaggtatctgcccgttgattcaaatcaaaacaaacagt 565
||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 cccccgttgaaaacaatatggataggtatctgcccgttgattcaaatcaaaacaaacagt 965
Query: 566 ctcttcaacagacaccccaatacatatcgacaactactcctaatcagattcctgactccg 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 ctcttcaacagacaccccaatacatatcgacaactactcctaatcagattcctgactccg 905
Query: 626 cagtcgacggtacgtatgttccaggtatgtttgaccaattggacgtgcaattattcggda 685
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 904 cagtcgacggtacgtatgttccaggtatgtttgaccaattggacgtgcaattattcggaa 845
Query: 686 gatacttaccaccgtatatgtctggtgt-amtgccaatgattcatagacaaaggrggrac 744
|||||||||||||||||||||||||||| | ||||||||||||| ||||||||| || ||
Sbjct: 844 gatacttaccaccgtatatgtctggtgtaactgccaatgattcaaagacaaaggaggaac 785
Query: 745 cattagatgataccaaaacagacactatatagtctcacwtggcttgctttctaatcgata 804
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 784 cattagatgataccaaaacagacactatatagtctcacttggcttgctttctaatcgata 725
Query: 805 gctttagtg 813
|||||||||
Sbjct: 724 gctttagtg 716
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4574
Number of Sequences: 1807
Number of extensions: 4574
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 1
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)